This function retrieves the protein-protein interaction network from STRINGdb and maps the protein ids to gene ids using Biomart.
Usage
get_stringPPI_to_stringGGI(sp_number, p = 0.95, sp = "rat")
Arguments
- sp_number
The species number for the STRINGdb object
- p
The percentile threshold for the STRINGdb network
- sp
The species for the Biomart object
Value
A protein-protein interaction network with gene ids
Examples
if (FALSE) { # interactive()
}